Detailed information of Aala_g1500.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002162013.2, tRNA wybutosine-synthesizing protein 4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02736Myosin_NMyosin N-terminal SH3-like domainDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004009DomainMyosin, N-terminal, SH3-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008989Homologous_superfamilyMyosin S1 fragment, N-terminalInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45615MYOSIN HEAVY CHAIN, NON-MUSCLEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46529TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003774Molecular Functioncytoskeletal motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016459Cellular Componentmyosin complexInterproscan
GO:0000146Molecular Functionmicrofilament motor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan
GO:0032982Cellular Componentmyosin filamentInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0008175Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0031591Biological Processwybutosine biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13785TMSB10; thymosin beta 10-Cytoskeleton proteinsko04812deepkoala

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