Detailed information of Aala_g1502.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4013858.1, retrotransposon-like family member retr-1 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32LQ4Betaine--homocysteine S-methyltransferase 1 OS=Danio rerio OX=7955 GN=bhmt PE=2 SV=1
Q5XGM3Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis OX=8355 GN=bhmt PE=2 SV=1
Q5M8Z0Betaine--homocysteine S-methyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=bhmt PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF02574S-methyl_transHomocysteine S-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR046348Homologous_superfamilySIS domain superfamilyInterproscan
IPR050986FamilySIS family GutQ/KpsF subfamily isomerasesInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR053080FamilyProtein phosphatase 1 regulatory subunit 27Interproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR003726DomainHomocysteine-binding domainInterproscan
IPR051524FamilyBetaine-homocysteine S-methyltransferaseInterproscan
IPR036589Homologous_superfamilyHomocysteine-binding domain superfamilyInterproscan
IPR017226FamilyBetaine-homocysteine S-methyltransferase, BHMTInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064POL PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR43347ACYL-COA SYNTHETASEInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR42745-Interproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR46899PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 27Interproscan
PTHR46120BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0050218Molecular Functionpropionate-CoA ligase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0097367Molecular Functioncarbohydrate derivative bindingInterproscan
GO:1901135Biological Processcarbohydrate derivative metabolic processInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0047150Molecular Functionbetaine-homocysteine S-methyltransferase activityInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00544BHMT; betaine-homocysteine S-methyltransferaseEC:2.1.1.5
Cysteine and methionine metabolismko00270deepkoala

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