Detailed information of Aala_g1503.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8041249.1, Zinc finger MYM-type protein 1 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8IVF4Dynein axonemal heavy chain 10 OS=Homo sapiens OX=9606 GN=DNAH10 PE=1 SV=4
Q9SMH3Dynein-1-alpha heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii OX=3055 GN=DHC1 PE=1 SV=1
P0C6F1Dynein axonemal heavy chain 2 OS=Mus musculus OX=10090 GN=Dnah2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBAN

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18198AAA_lid_11Dynein heavy chain AAA lid domainDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF12781AAA_9ATP-binding dynein motor regionDomainInterproscan
PF03028Dynein_heavyDynein heavy chain region D6 P-loop domain DomainInterproscan
PF18199Dynein_CDynein heavy chain C-terminal domainDomainInterproscan
PF12777MTMicrotubule-binding stalk of dynein motorDomainInterproscan
PF16516CC2-LZLeucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulatorCoiled-coilInterproscan
PF18414zf_C2H2_10C2H2 type zinc-finger DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR042219Homologous_superfamilyDynein heavy chain AAA lid domain superfamilyInterproscan
IPR041658DomainDynein heavy chain AAA lid domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR035706DomainDynein heavy chain, ATP-binding dynein motor regionInterproscan
IPR043160Homologous_superfamilyDynein heavy chain, C-terminal domain, barrel regionInterproscan
IPR004273DomainDynein heavy chain region D6 P-loop domainInterproscan
IPR041228DomainDynein heavy chain, C-terminal domainInterproscan
IPR024743DomainDynein heavy chain, coiled coil stalkInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR032419DomainNF-kappa-B essential modulator NEMO, CC2-LZ domainInterproscan
IPR051301FamilyOptineurin/NF-kappa-B Essential ModulatorInterproscan
IPR034735DomainNEMO, Zinc fingerInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22878UNCHARACTERIZEDInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR31553NF-KAPPA-B ESSENTIAL MODULATORInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043122Biological Processregulation of canonical NF-kappaB signal transductionInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan

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