Detailed information of Aala_g1509.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ4941094.1, hypothetical protein JOQ06_027381 [Pogonophryne albipinna]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8CHG7Rap guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Rapgef2 PE=1 SV=2
F1M386Rap guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Rapgef2 PE=1 SV=2
F1PBJ0Rap guanine nucleotide exchange factor 2 OS=Canis lupus familiaris OX=9615 GN=RAPGEF2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF00618RasGEF_NRasGEF N-terminal motifDomainInterproscan
PF01057Parvo_NS1Parvovirus non-structural protein NS1DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20413BLTP1_NBLTP1 N-terminal regionRepeatInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008937FamilyRas-like guanine nucleotide exchange factorInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR023578Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR000651DomainRas-like guanine nucleotide exchange factor, N-terminalInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR001257DomainParvovirus non-structural protein 1, helicase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR033616FamilyBridge-like lipid transfer protein family member 1Interproscan
IPR047104DomainBridge-like lipid transfer protein family member 1, N-terminalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002017RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR23113GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR31640TRANSMEMBRANE PROTEIN KIAA1109Interproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0019079Biological Processviral genome replicationInterproscan
GO:0048488Biological Processsynaptic vesicle endocytosisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10356MYO1; myosin I-Exosomeko04147deepkoala

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