Detailed information of Aala_g1524.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF1960256.1, unnamed protein product [Rotaria magnacalcarata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
P16423Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02838Glyco_hydro_20bGlycosyl hydrolase family 20, domain 2DomainInterproscan
PF00728Glyco_hydro_20Glycosyl hydrolase family 20, catalytic domainDomainInterproscan
PF03174CHB_HEX_CChitobiase/beta-hexosaminidase C-terminal domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00656Peptidase_C14Caspase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR025705FamilyBeta-hexosaminidaseInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR029018Homologous_superfamilyBeta-hexosaminidase-like, domain 2Interproscan
IPR004867DomainChitobiase C-terminal domainInterproscan
IPR015882DomainBeta-hexosaminidase, bacterial type, N-terminalInterproscan
IPR015883DomainGlycoside hydrolase family 20, catalytic domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR039808FamilyCadherinInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR001309DomainPeptidase C14, p20 domainInterproscan
IPR002138DomainPeptidase C14, caspase non-catalytic subunit p10Interproscan
IPR015917DomainPeptidase C14A, caspase catalytic domainInterproscan
IPR011600DomainPeptidase C14, caspase domainInterproscan
IPR029030Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR051290FamilyCASP8 and FADD-like apoptosis regulatorInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22600BETA-HEXOSAMINIDASEInterproscan
PTHR24027CADHERIN-23Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR48169DED DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004563Molecular Functionbeta-N-acetylhexosaminidase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030203Biological Processglycosaminoglycan metabolic processInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0000272Biological Processpolysaccharide catabolic processInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04397CASP7; caspase 7EC:3.4.22.60
Chaperones and folding catalystsko03110deepkoala
Peptidases and inhibitorsko01002deepkoala

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