Gene detail

Detailed information of Aala_g1536.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH2406050.1, reverse transcriptase family protein [Nitrosopumilus sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O46054	Cytochrome P450 4ae1 OS=Drosophila melanogaster OX=7227 GN=Cyp4ae1 PE=2 SV=1
Q27589	Cytochrome P450 4d2 OS=Drosophila melanogaster OX=7227 GN=Cyp4d2 PE=2 SV=2
Q6P2Q9	Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00244	14-3-3	14-3-3 protein	Repeat	Interproscan
PF00235	Profilin	Profilin	Domain	Interproscan
PF00067	p450	Cytochrome P450	Domain	Interproscan
PF10597	U5_2-snRNA_bdg	U5-snRNA binding site 2 of PrP8	Domain	Interproscan
PF02469	Fasciclin	Fasciclin domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023410	Domain	14-3-3 domain	Interproscan
IPR000308	Family	14-3-3 protein	Interproscan
IPR036815	Homologous_superfamily	14-3-3 domain superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036140	Homologous_superfamily	Profilin superfamily	Interproscan
IPR005455	Family	Profilin, eukaryotic type	Interproscan
IPR048278	Family	Profilin	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR027652	Family	Pre-mRNA-processing-splicing factor 8	Interproscan
IPR019581	Domain	Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding	Interproscan
IPR000782	Domain	FAS1 domain	Interproscan
IPR050904	Family	Cell adhesion and biosynthesis-related protein	Interproscan
IPR036378	Homologous_superfamily	FAS1 domain superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18860	14-3-3 PROTEIN	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR11604	PROFILIN	Interproscan
PTHR11140	PRE-MRNA SPLICING FACTOR PRP8	Interproscan
PTHR10900	PERIOSTIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0034613	Biological Process	protein localization	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0003785	Molecular Function	actin monomer binding	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0042989	Biological Process	sequestering of actin monomers	Interproscan
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0000244	Biological Process	spliceosomal tri-snRNP complex assembly	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0005682	Cellular Component	U5 snRNP	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0030619	Molecular Function	U1 snRNA binding	Interproscan
GO:0030620	Molecular Function	U2 snRNA binding	Interproscan
GO:0030623	Molecular Function	U5 snRNA binding	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0097157	Molecular Function	pre-mRNA intronic binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16197	YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta	-	Exosome	ko04147	deepkoala
K16197	YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta	-	Exosome	ko04147	deepkoala