Detailed information of Aala_g1545.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAF7641116.1, hypothetical protein LDENG_00293530 [Lucifuga dentata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
Q5RBG2E3 ubiquitin-protein ligase TRIM35 OS=Pongo abelii OX=9601 GN=TRIM35 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF15925SOSSCSOSS complex subunit CFamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00077RVPRetroviral aspartyl proteaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR026919FamilyAdhesion G-protein coupled receptor V1Interproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR031821FamilySOSS complex subunit CInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR050143FamilyTripartite motif-containingInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR018061DomainRetropepsinsInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR46682ADHESION G-PROTEIN COUPLED RECEPTOR V1Interproscan
PTHR31526SOSS COMPLEX SUBUNIT CInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0001965Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007194Biological Processnegative regulation of adenylate cyclase activityInterproscan
GO:0010855Molecular Functionadenylate cyclase inhibitor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0070876Cellular ComponentSOSS complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

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