Detailed information of Aala_g1552.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCG8035099.1, hypothetical protein [Candidatus Thiodiazotropha taylori]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
P16423Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P14381Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01432Peptidase_M3Peptidase family M3FamilyInterproscan
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF00183HSP90Hsp90 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR024077Homologous_superfamilyNeurolysin/Thimet oligopeptidase, domain 2Interproscan
IPR033851FamilyMitochondrial intermediate peptidaseInterproscan
IPR001567DomainPeptidase M3A/M3B catalytic domainInterproscan
IPR045090FamilyPeptidase M3A/M3BInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000999DomainRibonuclease III domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR003100DomainPAZ domainInterproscan
IPR036085Homologous_superfamilyPAZ domain superfamilyInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR001404FamilyHeat shock protein Hsp90 familyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11804PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14950DICER-RELATEDInterproscan
PTHR11528HEAT SHOCK PROTEIN 90 FAMILY MEMBERInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006518Biological Processpeptide metabolic processInterproscan
GO:0006627Biological Processprotein processing involved in protein targeting to mitochondrionInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004530Molecular Functiondeoxyribonuclease I activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006309Biological Processapoptotic DNA fragmentationInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0034605Biological Processcellular response to heatInterproscan
GO:0048471Cellular Componentperinuclear region of cytoplasmInterproscan
GO:0050821Biological Processprotein stabilizationInterproscan
GO:0097718Molecular Functiondisordered domain specific bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01410MIPEP; mitochondrial intermediate peptidaseEC:3.4.24.59
Mitochondrial biogenesisko03029deepkoala

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