Detailed information of Aala_g1556.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_029282603.1, uncharacterized protein LOC115004978 isoform X2 [Cottoperca gobio]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q09575Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF21505RPN2_N26S proteasome subunit RPN2, N-terminal domainDomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR004244FamilyTransposase, L1Interproscan
IPR048570Domain26S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11505L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR1094326S PROTEASOME NON-ATPASE REGULATORY SUBUNITInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197Biological ProcessretrotranspositionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008540Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0034515Cellular Componentproteasome storage granuleInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17320lplC; putative aldouronate transport system permease protein-Transportersko02000deepkoala

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