Detailed information of Aala_g156.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_056311241.1, B-cell receptor CD22-like [Danio aesculapii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IZ73Pseudouridylate synthase RPUSD2 OS=Homo sapiens OX=9606 GN=RPUSD2 PE=1 SV=2
Q149F1Pseudouridylate synthase RPUSD2 OS=Mus musculus OX=10090 GN=Rpusd2 PE=1 SV=2
Q09709Pseudouridylate synthase C18B11.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC18B11.02c PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001873FamilyEpithelial sodium channelInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR051860FamilyPlasmodium Circumsporozoite Invasion ProteinInterproscan
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR46958B-CELL RECEPTOR CD22Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR44826SPORE COAT PROTEIN SP85Interproscan
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0019903Molecular Functionprotein phosphatase bindingInterproscan
GO:0030888Biological Processregulation of B cell proliferationInterproscan
GO:0033691Molecular Functionsialic acid bindingInterproscan
GO:0042113Biological ProcessB cell activationInterproscan
GO:0042609Molecular FunctionCD4 receptor bindingInterproscan
GO:0050859Biological Processnegative regulation of B cell receptor signaling pathwayInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan
GO:0070062Cellular Componentextracellular exosomeInterproscan
GO:0000455Biological Processenzyme-directed rRNA pseudouridine synthesisInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14284NXF, TAP, MEX67; nuclear RNA export factor-Signaling pathways regulating pluripotency of stem cellsko04550deepkoala
Ribosome biogenesisko03009deepkoala

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