Detailed information of Aala_g1566.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1665075.1, hypothetical protein GQR58_019551 [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JMQ0Ribosome biogenesis protein bop1 OS=Danio rerio OX=7955 GN=bop1 PE=2 SV=1
Q7T0W1Ribosome biogenesis protein bop1-A OS=Xenopus laevis OX=8355 GN=bop1-a PE=2 SV=1
Q7ZXX9Ribosome biogenesis protein bop1-B OS=Xenopus laevis OX=8355 GN=bop1-b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF08145BOP1NTBOP1NT (NUC169) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR028598FamilyWD repeat BOP1/Erb1Interproscan
IPR012953DomainBOP1, N-terminal domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR13866SPARC OSTEONECTINInterproscan
PTHR31635REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR17605RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005518Molecular Functioncollagen bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0050840Molecular Functionextracellular matrix bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0043021Molecular Functionribonucleoprotein complex bindingInterproscan
GO:0070545Cellular ComponentPeBoW complexInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22069LYRM4; LYR motif-containing protein 4-Mitochondrial biogenesisko03029deepkoala

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