Gene detail

Detailed information of Aala_g1570.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047496558.1, uncharacterized protein LOC125044150 [Penaeus chinensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7TD08	Enzymatic polyprotein OS=Cestrum yellow leaf curling virus OX=175814 GN=ORF V PE=3 SV=1
P15629	Enzymatic polyprotein OS=Soybean chlorotic mottle virus OX=10651 GN=ORF V PE=3 SV=2
P31843	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00551	Formyl_trans_N	Formyl transferase	Domain	Interproscan
PF02911	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR047180	Family	Hydrogenase maturation factor HoxX-like	Interproscan
IPR011034	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan
IPR018376	Conserved_site	Enoyl-CoA hydratase/isomerase, conserved site	Interproscan
IPR036477	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR002376	Domain	Formyl transferase, N-terminal	Interproscan
IPR005793	Domain	Formyl transferase, C-terminal	Interproscan
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR43388	HYDROGENASE MATURATION FACTOR HOXX	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0017147	Molecular Function	Wnt-protein binding	Interproscan
GO:0042813	Molecular Function	Wnt receptor activity	Interproscan
GO:0060070	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan