Detailed information of Aala_g1586.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047124386.1, tigger transposable element-derived protein 6-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q94522Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Scsalpha1 PE=2 SV=3
B3FHT4Succinate--CoA ligase [ADP-forming] subunit alpha OS=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) OX=478820 GN=SCSa PE=1 SV=1
Q9YGD2Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial (Fragment) OS=Columba livia OX=8932 GN=SUCLG1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF02629CoA_bindingCoA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR003781DomainCoA-bindingInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR45749-Interproscan
PTHR11117SUCCINYL-COA LIGASE SUBUNIT ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0004775Molecular Functionsuccinate-CoA ligase (ADP-forming) activityInterproscan
GO:0004776Molecular Functionsuccinate-CoA ligase (GDP-forming) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0009361Cellular Componentsuccinate-CoA ligase complex (ADP-forming)Interproscan

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