Detailed information of Aala_g159.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_055026941.1, uncharacterized protein LOC129416619 [Misgurnus anguillicaudatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF03155Alg6_Alg8ALG6, ALG8 glycosyltransferase familyFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF14874PapD-likeFlagellar-associated PapD-likeDomainInterproscan
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR053231FamilyG-protein coupled receptor LN-TM7Interproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR004856FamilyGlycosyl transferase, ALG6/ALG8Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR026173FamilySperm-associated antigen 17Interproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR050274FamilyNuclear hormone receptor family NR2 subfamilyInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45902LATROPHILIN RECEPTOR-LIKE PROTEIN AInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR21963PF6Interproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24083NUCLEAR HORMONE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003351Biological Processepithelial cilium movement involved in extracellular fluid movementInterproscan
GO:1904158Biological Processaxonemal central apparatus assemblyInterproscan
GO:1990716Cellular Componentaxonemal central apparatusInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

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