Gene detail

Detailed information of Aala_g1599.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_022785184.1, zinc finger MYM-type protein 1-like [Stylophora pistillata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9CUX1	52 kDa repressor of the inhibitor of the protein kinase OS=Mus musculus OX=10090 GN=Thap12 PE=2 SV=2
O43422	52 kDa repressor of the inhibitor of the protein kinase OS=Homo sapiens OX=9606 GN=THAP12 PE=1 SV=2
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF03368	Dicer_dimer	Dicer dimerisation domain	Domain	Interproscan
PF14291	DUF4371	Domain of unknown function (DUF4371)	Family	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR005034	Domain	Dicer dimerisation domain	Interproscan
IPR038248	Homologous_superfamily	Dicer dimerisation domain superfamily	Interproscan
IPR053110	Family	Ribosomal L1 domain-containing protein and Transcription factor	Interproscan
IPR025398	Domain	Domain of unknown function DUF4371	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR48162	YALI0A06930P	Interproscan
PTHR45749	-	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016891	Molecular Function	RNA endonuclease activity, producing 5'-phosphomonoesters	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan