Detailed information of Aala_g1604.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015762645.1, PREDICTED: uncharacterized protein LOC107341697 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UL36Zinc finger protein 236 OS=Homo sapiens OX=9606 GN=ZNF236 PE=1 SV=2
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
O62702Keratocan OS=Bos taurus OX=9913 GN=KERA PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF02945Endonuclease_7Recombination endonuclease VIIDomainInterproscan
PF03175DNA_pol_B_2DNA polymerase type B, organellar and viralFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF13306LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF08539HbrBHbrB-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR038563Homologous_superfamilyRecombination endonuclease VII superfamilyInterproscan
IPR004211FamilyRecombination endonuclease VIIInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan
IPR004868DomainDNA-directed DNA polymerase, family B, mitochondria/virusInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050328FamilyMultifunctional Developmental and Immune ReceptorInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR026906RepeatBspA-type LRR regionInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR013745FamilyTORC2 component Bit61/PRR5Interproscan
IPR016159Homologous_superfamilyCullin repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24399ZINC FINGER AND BTB DOMAIN-CONTAININGInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR32428TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0031932Cellular ComponentTORC2 complexInterproscan
GO:0038203Biological ProcessTORC2 signalingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20411PRR5, PROTOR; proline-rich protein 5-Transportersko02000deepkoala
Membrane traffickingko04131deepkoala

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