Detailed information of Aala_g1617.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4034423.1, Retrovirus-related Pol poly from transposon TNT 1-94, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q03278Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00631G-gammaGGL domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07701HNOBAHeme NO binding associatedDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039598FamilyHMG domain-containing protein 3Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036284Homologous_superfamilyG-protein gamma-like domain superfamilyInterproscan
IPR001770FamilyG-protein, gamma subunitInterproscan
IPR015898DomainG-protein gamma-like domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR042463Homologous_superfamilyHaem NO binding associated domain superfamilyInterproscan
IPR011645DomainHaem NO binding associatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17609HMG DOMAIN-CONTAINING PROTEIN 3Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR13809GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNITInterproscan
PTHR47481-Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005834Cellular Componentheterotrimeric G-protein complexInterproscan
GO:0031681Molecular FunctionG-protein beta-subunit bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004383Molecular Functionguanylate cyclase activityInterproscan
GO:0006182Biological ProcesscGMP biosynthetic processInterproscan

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