Detailed information of Aala_g1619.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015274688.1, PREDICTED: PHD finger-like domain-containing protein 5A isoform X2 [Gekko japonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7RTV0PHD finger-like domain-containing protein 5A OS=Homo sapiens OX=9606 GN=PHF5A PE=1 SV=1
P83870PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1
P83871PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF14222MOR2-PAG1_NCell morphogenesis N-terminalFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF08241Methyltransf_11Methyltransferase domainDomainInterproscan
PF03660PHF5PHF5-like proteinFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR039867FamilyProtein furry/Tao3/Mor2Interproscan
IPR025614DomainCell morphogenesis protein N-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR040324FamilyWD repeat-containing protein WDR44/Dgr2Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013216DomainMethyltransferase type 11Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR005345FamilyPHF5-likeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR12295FURRY-RELATEDInterproscan
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR14221WD REPEAT DOMAIN 44Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR13120PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5AInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0030427Cellular Componentsite of polarized growthInterproscan
GO:0031175Biological Processneuron projection developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan

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