Detailed information of Aala_g1645.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4032985.1, Retrovirus-related Pol poly from transposon, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08510Potassium voltage-gated channel protein Shaker OS=Drosophila melanogaster OX=7227 GN=Sh PE=1 SV=3
Q09470Potassium voltage-gated channel subfamily A member 1 OS=Homo sapiens OX=9606 GN=KCNA1 PE=1 SV=2
P16388Potassium voltage-gated channel subfamily A member 1 OS=Mus musculus OX=10090 GN=Kcna1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR003972FamilyPotassium channel, voltage dependent, Kv1Interproscan
IPR003968FamilyPotassium channel, voltage dependent, KvInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064POL PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02839prfH; peptide chain release factor-Ion channelsko04040deepkoala
Translation factorsko03012deepkoala

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