Detailed information of Aala_g1652.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4029616.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR011759DomainCytochrome C oxidase subunit II, transmembrane domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR039110FamilyKNL2-likeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR034132DomainRetropepsin Saci-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR16124MIS18-BINDING PROTEIN 1Interproscan
PTHR33064POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022900Biological Processelectron transport chainInterproscan
GO:0000775Cellular Componentchromosome, centromeric regionInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

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