Gene detail

Detailed information of Aala_g1658.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_048581207.1, uncharacterized protein LOC125556670 isoform X4 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P21328	RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
P21329	RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
P87177	Uncharacterized WD repeat-containing protein C3D6.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC3D6.12 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF13976	gag_pre-integrs	GAG-pre-integrase domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00135	COesterase	Carboxylesterase family	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR025724	Domain	GAG-pre-integrase domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR050309	Family	Type-B Carboxylesterase/Lipase	Interproscan
IPR002018	Domain	Carboxylesterase, type B	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR35711	EXPRESSED PROTEIN	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11559	CARBOXYLESTERASE	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24184	SI:CH211-189E2.2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11511	APITD1, CENPS, MHF1; centromere protein S	-	Transporters	ko02000	deepkoala
K11511	APITD1, CENPS, MHF1; centromere protein S	-	DNA repair and recombination proteins	ko03400	deepkoala