Detailed information of Aala_g166.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH1241681.1, RNF113A [Branchiostoma lanceolatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q67ER4E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1
O15541E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1
Q8IZP6RING finger protein 113B OS=Homo sapiens OX=9606 GN=RNF113B PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF04937DUF659Protein of unknown function (DUF 659)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039971FamilyPre-mRNA-splicing factor CWC24-likeInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR051822FamilyGlycosyl Hydrolase Family 84Interproscan
IPR033375FamilyCGG triplet repeat-binding protein 1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR007021DomainDomain of unknown function DUF659Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12930ZINC FINGER PROTEIN 183Interproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR13170O-GLCNACASEInterproscan
PTHR32344U1-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005684Cellular ComponentU2-type spliceosomal complexInterproscan
GO:0034247Biological ProcesssnoRNA splicingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

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