Detailed information of Aala_g1661.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_048249855.1, uncharacterized protein LOC124128307 [Haliotis rufescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P87294Putative RNA polymerase II transcriptional coactivator OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16A10.02 PE=1 SV=1
P14019Ornithine decarboxylase OS=Cricetulus griseus OX=10029 GN=ODC1 PE=2 SV=3
Q9I8S4Antizyme inhibitor 2 OS=Xenopus laevis OX=8355 GN=azin2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyPC4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF02229PC4Transcriptional Coactivator p15 (PC4)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR009044Homologous_superfamilyssDNA-binding transcriptional regulatorInterproscan
IPR045125FamilyRNA polymerase II transcriptional coactivator Sub1/Tcp4-likeInterproscan
IPR003173DomainTranscriptional coactivator p15 (PC4), C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0060261Biological Processpositive regulation of transcription initiation by RNA polymerase IIInterproscan

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