Detailed information of Aala_g1667.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_042228115.1, zinc finger BED domain-containing protein 5-like [Homarus americanus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q9ZT94Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03223V-ATPase_CV-ATPase subunit CFamilyInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF00493MCMMCM P-loop domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036132Homologous_superfamilyVacuolar ATP synthase subunit C superfamilyInterproscan
IPR004907FamilyATPase, V1 complex, subunit CInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050329FamilyGLI C2H2-type zinc-fingerInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031327FamilyMini-chromosome maintenance proteinInterproscan
IPR001208DomainMCM domainInterproscan
IPR018525Conserved_siteMini-chromosome maintenance, conserved siteInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000034DomainLaminin IVInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10137V-TYPE PROTON ATPASE SUBUNIT CInterproscan
PTHR19818ZINC FINGER PROTEIN ZIC AND GLIInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR11630DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBERInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015078Molecular Functionproton transmembrane transporter activityInterproscan
GO:0033180Cellular Componentproton-transporting V-type ATPase, V1 domainInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0046961Molecular Functionproton-transporting ATPase activity, rotational mechanismInterproscan
GO:0000221Cellular Componentvacuolar proton-transporting V-type ATPase, V1 domainInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0000727Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006270Biological ProcessDNA replication initiationInterproscan
GO:0006271Biological ProcessDNA strand elongation involved in DNA replicationInterproscan
GO:0017116Molecular Functionsingle-stranded DNA helicase activityInterproscan
GO:0042555Cellular ComponentMCM complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0008045Biological Processmotor neuron axon guidanceInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0016358Biological Processdendrite developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09223GFI1; growth factor independent 1-Transcription factorsko03000deepkoala

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