Detailed information of Aala_g1672.t1 in Alatina alata

Genomic Location: :...
NR annotation: MPC72906.1, hypothetical protein [Portunus trituberculatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q94K49Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1
Q8R455Transient receptor potential cation channel subfamily M member 8 OS=Rattus norvegicus OX=10116 GN=Trpm8 PE=1 SV=4
Q8R4D5Transient receptor potential cation channel subfamily M member 8 OS=Mus musculus OX=10090 GN=Trpm8 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF18139LSDAT_eukSLOG in TRPMFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004244FamilyTransposase, L1Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR006580DomainZinc finger, TTF-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR000104FamilyAntifreeze protein, type IInterproscan
IPR050927FamilyTransient receptor potential cation channel MInterproscan
IPR041491DomainTRPM, SLOG domainInterproscan
IPR026103FamilyHarbinger transposase-derived nuclease, animalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR11505L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45749-Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR13800TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Interproscan
PTHR22930UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197Biological ProcessretrotranspositionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0050825Molecular Functionice bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0070838Biological Processmetal ion transportInterproscan
GO:0098655Biological Processmonoatomic cation transmembrane transportInterproscan

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