Detailed information of Aala_g168.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG5685688.1, hypothetical protein BaRGS_027198 [Batillaria attramentaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ES56Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trappc4 PE=1 SV=1
Q2TBL9Trafficking protein particle complex subunit 4 OS=Bos taurus OX=9913 GN=TRAPPC4 PE=2 SV=1
Q69BT7Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF04099SybindinSybindin-like family FamilyInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR007233FamilyTrafficking protein particle complex subunitInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR10199THROMBOSPONDINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030008Cellular ComponentTRAPP complexInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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