Detailed information of Aala_g1681.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0230719.1, hypothetical protein LSAT2_018922 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
Q04202Transposable element Tcb2 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00928Adap_comp_subAdaptor complexes medium subunit familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR018240Conserved_siteClathrin adaptor, mu subunit, conserved siteInterproscan
IPR001392FamilyClathrin adaptor, mu subunitInterproscan
IPR028565DomainMu homology domainInterproscan
IPR050431FamilyAdaptor complexes medium subunitInterproscan
IPR036168Homologous_superfamilyAP-2 complex subunit mu, C-terminal superfamilyInterproscan
IPR043512DomainMu2, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10529AP COMPLEX SUBUNIT MUInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030131Cellular Componentclathrin adaptor complexInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0030122Cellular ComponentAP-2 adaptor complexInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0035615Molecular Functionclathrin adaptor activityInterproscan
GO:0072583Biological Processclathrin-dependent endocytosisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18740EXD1, EGL; exonuclease 3'-5' domain-containing protein 1-Messenger RNA biogenesisko03019deepkoala

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