Detailed information of Aala_g1692.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0225811.1, hypothetical protein LSAT2_023444, partial [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08928Lamin Dm0 OS=Drosophila melanogaster OX=7227 GN=Lam PE=1 SV=4
P20700Lamin-B1 OS=Homo sapiens OX=9606 GN=LMNB1 PE=1 SV=2
P70615Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02196RBDRaf-like Ras-binding domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00038FilamentIntermediate filament proteinCoiled-coilInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR042222Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR003116DomainRaf-like Ras-bindingInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR046995FamilyRegulator of G-protein signaling 10/12/14-likeInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR039008DomainIntermediate filament, rod domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10676DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45945REGULATOR OF G-PROTEIN SIGNALING LOCOInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR45721LAMIN DM0-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR47160PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005930Cellular ComponentaxonemeInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060294Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729Cellular Component9+2 motile ciliumInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008277Biological Processregulation of G protein-coupled receptor signaling pathwayInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0005652Cellular Componentnuclear laminaInterproscan
GO:0006998Biological Processnuclear envelope organizationInterproscan
GO:0007097Biological Processnuclear migrationInterproscan
GO:0031507Biological Processheterochromatin formationInterproscan
GO:0051664Biological Processnuclear pore localizationInterproscan
GO:0090435Biological Processprotein localization to nuclear envelopeInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10104FCN; ficolin-Ribosomeko03011deepkoala
Lectinsko04091deepkoala

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