Gene detail

Detailed information of Aala_g1696.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044178605.1, uncharacterized protein LOC114952318 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6R2W3	SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
Q8N7M0	Dynein light chain Tctex-type 5 OS=Homo sapiens OX=9606 GN=DYNLT5 PE=1 SV=2
Q5JR98	Dynein light chain Tctex-type 4 OS=Homo sapiens OX=9606 GN=DYNLT4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03645	Tctex-1	Tctex-1 family	Family	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR051887	Family	Glycosyl Hydrolase 18 Domain-Containing Protein	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR005334	Family	Dynein light chain Tctex-1 like	Interproscan
IPR038586	Homologous_superfamily	Tctex-1-like superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR052343	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR46880	RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR46290	DI-N-ACETYLCHITOBIASE	Interproscan
PTHR21255	T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN	Interproscan
PTHR46890	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR37445	PROTEIN CBG24663	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0009313	Biological Process	oligosaccharide catabolic process	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005868	Cellular Component	cytoplasmic dynein complex	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25421	DYNLT5, TCTEX1D1; dynein light chain Tctex-type 5	-	Cytoskeleton proteins	ko04812	deepkoala