Detailed information of Aala_g1704.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020627207.1, uncharacterized protein LOC110064491, partial [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF12215Glyco_hydr_116Nbeta-glucosidase 2, glycosyl-hydrolase family 116 N-termFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR050972FamilySerine-aspartate repeat-containing proteinInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR047139FamilytRNA endonuclease ANKZF1/VMS1Interproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR000488DomainDeath domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR053110FamilyRibosomal L1 domain-containing protein and Transcription factorInterproscan
IPR052566FamilyNon-lysosomal glucosylceramidaseInterproscan
IPR024462DomainGlycosyl-hydrolase family 116, N-terminalInterproscan
IPR053134FamilyRNA-directed DNA polymerase homologInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR34403TOL-PAL SYSTEM PROTEIN TOLAInterproscan
PTHR16036ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1Interproscan
PTHR47679PROTEIN TORNADO 1Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR48162YALI0A06930PInterproscan
PTHR12654BILE ACID BETA-GLUCOSIDASE-RELATEDInterproscan
PTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0008422Molecular Functionbeta-glucosidase activityInterproscan

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