Detailed information of Aala_g1705.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI8516461.1, hypothetical protein Bbelb_050420 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q91W43Glycine dehydrogenase (decarboxylating), mitochondrial OS=Mus musculus OX=10090 GN=Gldc PE=1 SV=1
P23378Glycine dehydrogenase (decarboxylating), mitochondrial OS=Homo sapiens OX=9606 GN=GLDC PE=1 SV=2
P15505Glycine dehydrogenase (decarboxylating), mitochondrial OS=Gallus gallus OX=9031 GN=GLDC PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF13890Rab3-GTPase_catRab3 GTPase-activating protein catalytic subunitFamilyInterproscan
PF14649Spatacsin_CSpatacsin C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR045700FamilyRab3GAP catalytic subunitInterproscan
IPR026147DomainRab3GAP catalytic subunit, conserved domainInterproscan
IPR028103FamilySpatacsinInterproscan
IPR028107DomainSpatacsin, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR21422RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITInterproscan
PTHR13650UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18138acrB, mexB, adeJ, smeE, mtrD, cmeB; multidrug efflux pump-Antimicrobial resistance genesko01504deepkoala

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