Detailed information of Aala_g1706.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF4833947.1, unnamed protein product [Rotaria socialis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02862DDHDDDHD domainFamilyInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF19031Intu_longin_1First Longin domain of INTU, CCZ1 and HPS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004177DomainDDHD domainInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043987DomainCCZ1/INTU/HSP4, first Longin domainInterproscan
IPR013176FamilyVacuolar fusion protein Ccz1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23509PA-PL1 PHOSPHOLIPASE FAMILYInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan
PTHR35317OS04G0629600 PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13056UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004620Molecular Functionphospholipase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0035658Cellular ComponentMon1-Ccz1 complexInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14805DDX24, MAK5; ATP-dependent RNA helicase DDX24/MAK5EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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