Gene detail

Detailed information of Aala_g1721.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_033630163.1, DNA-dependent protein kinase catalytic subunit-like [Asterias rubens]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P10394	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
Q09575	Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1
P03359	Gag-Pol polyprotein OS=Woolly monkey sarcoma virus OX=11970 GN=pol PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF08163	DNAPKcs_CC3	DNA-dependent protein kinase catalytic subunit, CC3	Repeat	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052958	Family	Interferon-induced PKR regulator	Interproscan
IPR012582	Domain	DNA-dependent protein kinase catalytic subunit, CC3	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR46289	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18919	hokC_D; protein HokC/D	-	DNA repair and recombination proteins	ko03400	deepkoala
K18919	hokC_D; protein HokC/D	-	Prokaryotic defense system	ko02048	deepkoala