Gene detail

Detailed information of Aala_g1722.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012566983.2, polyunsaturated fatty acid 5-lipoxygenase [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q8IVV2	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4
C8YR32	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1
P70345	Bcl-2-like protein 2 OS=Mus musculus OX=10090 GN=Bcl2l2 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF00017	SH2	SH2 domain	Domain	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00452	Bcl-2	Apoptosis regulator proteins, Bcl-2 family	Family	Interproscan
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF02196	RBD	Raf-like Ras-binding domain	Domain	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF05585	DUF1758	Putative peptidase (DUF1758)	Family	Interproscan
PF02140	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR002475	Family	Bcl2-like	Interproscan
IPR026298	Family	Bcl-2 family	Interproscan
IPR036834	Homologous_superfamily	Bcl-2-like superfamily	Interproscan
IPR046371	Domain	Bcl-2, Bcl-2 homology region 1-3	Interproscan
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR052970	Family	Inner ear hair cell lipoxygenase homology domain-containing protein	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR003116	Domain	Raf-like Ras-binding	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR008737	Domain	Peptidase aspartic, putative	Interproscan
IPR000922	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR043159	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR11256	BCL-2 RELATED	Interproscan
PTHR45901	PROTEIN CBG12474	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0005741	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0008630	Biological Process	intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan
GO:0042803	Molecular Function	protein homodimerization activity	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0097192	Biological Process	extrinsic apoptotic signaling pathway in absence of ligand	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21893	NGB; neuroglobin	-	Transporters	ko02000	deepkoala