Detailed information of Aala_g1729.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_019616086.1, PREDICTED: uncharacterized protein LOC109463676 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|UBC-like|UBC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00583Acetyltransf_1Acetyltransferase (GNAT) familyFamilyInterproscan
PF05276SH3BP5SH3 domain-binding protein 5 (SH3BP5)FamilyInterproscan
PF03446NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenaseDomainInterproscan
PF14833NAD_binding_11NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenaseDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan
PF05378Hydant_A_NHydantoinase/oxoprolinase N-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050785FamilyPAN2-PAN3 complex catalytic subunitInterproscan
IPR028881DomainPAN2, UCH domainInterproscan
IPR011360FamilyComplement B/C2Interproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR000182DomainGNAT domainInterproscan
IPR007940FamilySH3-binding 5Interproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR013328Homologous_superfamily6-phosphogluconate dehydrogenase, domain 2Interproscan
IPR006115Domain6-phosphogluconate dehydrogenase, NADP-bindingInterproscan
IPR029154Domain3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR023313Active_siteUbiquitin-conjugating enzyme, active siteInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR050113FamilyUbiquitin-conjugating enzymeInterproscan
IPR008040DomainHydantoinase/oxoprolinase, N-terminalInterproscan
IPR045079FamilyOxoprolinase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2Interproscan
PTHR46393SUSHI DOMAIN-CONTAINING PROTEINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR20916CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEINInterproscan
PTHR19423SH3 DOMAIN-BINDING PROTEIN 5Interproscan
PTHR34723PROTEIN CBG17025Interproscan
PTHR229813-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24067UBIQUITIN-CONJUGATING ENZYME E2Interproscan
PTHR113655-OXOPROLINASE RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0006956Biological Processcomplement activationInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0004860Molecular Functionprotein kinase inhibitor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0061099Biological Processnegative regulation of protein tyrosine kinase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006574Biological Processvaline catabolic processInterproscan
GO:0008442Molecular Function3-hydroxyisobutyrate dehydrogenase activityInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0017168Molecular Function5-oxoprolinase (ATP-hydrolyzing) activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02911RP-L32, MRPL32, rpmF; large subunit ribosomal protein L32-Viral proteinsko03200deepkoala
Chromosome and associated proteinsko03036deepkoala
Ubiquitin systemko04121deepkoala
Ribosomeko03011deepkoala

TOP