Genomic Location: :...
NR annotation: XP_047137679.1, alsin [Hydra vulgaris]
| CDS | |||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q9N1T2 | X-linked retinitis pigmentosa GTPase regulator OS=Canis lupus familiaris OX=9615 GN=RPGR PE=2 SV=1 |
| Q92834 | X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens OX=9606 GN=RPGR PE=1 SV=2 |
| Q6PAV2 | Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF19798 | Sulfotransfer_5 | Sulfotransferase domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF00538 | Linker_histone | linker histone H1 and H5 family | Domain | Interproscan |
| PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| PF13359 | DDE_Tnp_4 | DDE superfamily endonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR053226 | Family | Pyrrolopyrazine Biosynthesis Cluster Protein F | Interproscan |
| IPR026630 | Family | EPM2A-interacting protein 1/ZBED8-like | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR005818 | Domain | Linker histone H1/H5, domain H15 | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR000408 | Repeat | Regulator of chromosome condensation, RCC1 | Interproscan |
| IPR051210 | Family | Ubiquitin ligases and GEF domain-containing protein | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR026103 | Family | Harbinger transposase-derived nuclease, animal | Interproscan |
| IPR027806 | Domain | Harbinger transposase-derived nuclease domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48331 | SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR45913 | EPM2A-INTERACTING PROTEIN 1 | Interproscan |
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR47027 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR22870 | REGULATOR OF CHROMOSOME CONDENSATION | Interproscan |
| PTHR22930 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0000786 | Cellular Component | nucleosome | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006334 | Biological Process | nucleosome assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K26529 | F2L; Poxviridae dUTP diphosphatase | EC:3.6.1.23 | Transporters | ko02000 | deepkoala |
| Viral proteins | ko03200 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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