Detailed information of Aala_g1738.t1 in Alatina alata

Genomic Location: :...
NR annotation: RMX57970.1, hypothetical protein pdam_00023548 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q04202Transposable element Tcb2 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1
P35072Transposable element Tcb1 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00248Aldo_ket_redAldo/keto reductase familyDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF01593Amino_oxidaseFlavin containing amine oxidoreductaseDomainInterproscan
PF02174IRSPTB domain (IRS-1 type)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036812Homologous_superfamilyNADP-dependent oxidoreductase domain superfamilyInterproscan
IPR023210DomainNADP-dependent oxidoreductase domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR051510FamilySuperkiller complex protein 8Interproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR002937DomainAmine oxidaseInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050281FamilyFlavin monoamine oxidase and related enzymesInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR050996FamilyDocking Protein Family (DOK)Interproscan
IPR002404DomainIRS-type PTB domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR000999DomainRibonuclease III domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36963HELICASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR44090WD REPEAT-CONTAINING PROTEIN 61Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10742FLAVIN MONOAMINE OXIDASEInterproscan
PTHR21258DOCKING PROTEIN RELATEDInterproscan
PTHR22954RETROVIRAL PROTEASE-RELATEDInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR14950DICER-RELATEDInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016593Cellular ComponentCdc73/Paf1 complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007169Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19719COL2A; collagen type II alpha-Glycosaminoglycan binding proteinsko00536deepkoala

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