Detailed information of Aala_g1739.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4007817.1, Transposable element Tcb1 transposase [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q80WQ9Zinc finger BED domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zbed4 PE=2 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q09575Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR044823FamilyTrihelix transcription factor ASIL1/2-likeInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR052076FamilyTransient receptor potential cation channelInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052717FamilyVacuolar processing and transposase activity regulatorsInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR042572Homologous_superfamilyCarnitine o-acyltransferase, N-terminalInterproscan
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR050726FamilyMetabotropic Glutamate ReceptorInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR000337FamilyGPCR, family 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR19963CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR48209AGL056WPInterproscan
PTHR31307TRIHELIX TRANSCRIPTION FACTOR ASIL2Interproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47143TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESSInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46169DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM AInterproscan
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan
PTHR24060METABOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0004095Molecular Functioncarnitine O-palmitoyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006635Biological Processfatty acid beta-oxidationInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0001640Molecular Functionadenylate cyclase inhibiting G protein-coupled glutamate receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007216Biological ProcessG protein-coupled glutamate receptor signaling pathwayInterproscan
GO:0051966Biological Processregulation of synaptic transmission, glutamatergicInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24637ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1)EC:2.3.2.-
Ubiquitin systemko04121deepkoala

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