Gene detail

Detailed information of Aala_g1741.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031561205.1, DNA-binding protein SMUBP-2-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P38935	DNA-binding protein SMUBP-2 OS=Homo sapiens OX=9606 GN=IGHMBP2 PE=1 SV=3
Q60560	DNA-binding protein SMUBP-2 OS=Mesocricetus auratus OX=10036 GN=IGHMBP2 PE=1 SV=1
P40694	DNA-binding protein SMUBP-2 OS=Mus musculus OX=10090 GN=Ighmbp2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05856	ARPC4	ARP2/3 complex 20 kDa subunit (ARPC4)	Family	Interproscan
PF13086	AAA_11	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034666	Homologous_superfamily	Arp2/3 complex subunit 2/4	Interproscan
IPR008384	Family	Actin-related protein 2/3 complex subunit 4	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR050534	Family	Coronaviruses polyprotein 1ab	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22629	ARP2/3 COMPLEX 20 KD SUBUNIT	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR48209	AGL056WP	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43788	DNA2/NAM7 HELICASE FAMILY MEMBER	Interproscan
PTHR33198	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005885	Cellular Component	Arp2/3 protein complex	Interproscan
GO:0015629	Cellular Component	actin cytoskeleton	Interproscan
GO:0030041	Biological Process	actin filament polymerization	Interproscan
GO:0034314	Biological Process	Arp2/3 complex-mediated actin nucleation	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0043139	Molecular Function	5'-3' DNA helicase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05755	ARPC4; actin related protein 2/3 complex, subunit 4	-	Transporters	ko02000	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala
			Cytoskeleton proteins	ko04812	deepkoala