Detailed information of Aala_g1743.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4007695.1, Retrovirus-related Pol poly from transposon TNT 1-94 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
Q94HW2Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF06602Myotub-relatedMyotubularin-like phosphatase domainDomainInterproscan
PF01505VaultMajor Vault Protein repeat domainDomainInterproscan
PF17795Vault_3Major Vault Protein Repeat domainDomainInterproscan
PF17796Vault_4Major Vault Protein repeat domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR042423FamilyPiggyBac transposable element-derived protein 5Interproscan
IPR010569DomainMyotubularin-like, phosphatase domainInterproscan
IPR030564FamilyMyotubularin familyInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR041139DomainMajor vault protein repeat domainInterproscan
IPR043023Homologous_superfamilyMajor vault protein repeat domain superfamilyInterproscan
IPR002499RepeatMajor vault protein, N-terminalInterproscan
IPR039059FamilyMajor vault proteinInterproscan
IPR040989DomainMajor vault protein repeat domain 3Interproscan
IPR041136DomainMajor vault protein repeat domain 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR28576PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 5Interproscan
PTHR10807MYOTUBULARIN-RELATEDInterproscan
PTHR14165MAJOR VAULT PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004803Molecular Functiontransposase activityInterproscan
GO:0098038Biological Processnon-replicative DNA transpositionInterproscan
GO:0004438Molecular Functionphosphatidylinositol-3-phosphate phosphatase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046856Biological Processphosphatidylinositol dephosphorylationInterproscan
GO:0052629Molecular Functionphosphatidylinositol-3,5-bisphosphate 3-phosphatase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

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