Gene detail

Detailed information of Aala_g1744.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_035685684.1, uncharacterized protein LOC118422272 [Branchiostoma floridae]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q64487	Receptor-type tyrosine-protein phosphatase delta OS=Mus musculus OX=10090 GN=Ptprd PE=1 SV=3
Q63170	Dynein axonemal heavy chain 7 OS=Rattus norvegicus OX=10116 GN=Dnah7 PE=2 SV=2
Q8WXX0	Dynein axonemal heavy chain 7 OS=Homo sapiens OX=9606 GN=DNAH7 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47481	-	Interproscan
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02970	RP-S21, MRPS21, rpsU; small subunit ribosomal protein S21	-	Ribosome	ko03011	deepkoala