Detailed information of Aala_g1748.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3985389.1, Retrovirus-related Pol poly from transposon TNT 1-94 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q149M9NACHT domain- and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=NWD1 PE=1 SV=3
A6H603NACHT domain- and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Nwd1 PE=2 SV=2
Q8BUZ3Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF13271DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF13904CCDC34Coiled-coil domain-containing protein 34Coiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR025139DomainDomain of unknown function DUF4062Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR026106FamilyMicrotubule-associated protein 9Interproscan
IPR025259DomainCoiled-coil domain-containing protein 34/181Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR14739MICROTUBULE-ASSOCIATED PROTEIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000235Cellular Componentastral microtubuleInterproscan
GO:0000281Biological Processmitotic cytokinesisInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0051225Biological Processspindle assemblyInterproscan
GO:0090307Biological Processmitotic spindle assemblyInterproscan
GO:1902412Biological Processregulation of mitotic cytokinesisInterproscan

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