Detailed information of Aala_g175.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020627207.1, uncharacterized protein LOC110064491, partial [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01082Cu2_monooxygenCopper type II ascorbate-dependent monooxygenase, N-terminal domainDomainInterproscan
PF03998Utp11Utp11 proteinFamilyInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07744SPOCSPOC domainDomainInterproscan
PF00019TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000945FamilyDopamine beta-hydroxylase-likeInterproscan
IPR008977Homologous_superfamilyPHM/PNGase F domain superfamilyInterproscan
IPR036939Homologous_superfamilyCopper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamilyInterproscan
IPR000323DomainCopper type II, ascorbate-dependent monooxygenase, N-terminalInterproscan
IPR007144FamilySmall-subunit processome, Utp11Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR010912DomainSpen paralogue/orthologue C-terminal, metazoaInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR001839DomainTransforming growth factor-beta, C-terminalInterproscan
IPR017948Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR015615FamilyTransforming growth factor-beta-relatedInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10157DOPAMINE BETA HYDROXYLASE RELATEDInterproscan
PTHR12838U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23189RNA RECOGNITION MOTIF-CONTAININGInterproscan
PTHR11848TGF-BETA FAMILYInterproscan
PTHR15735FCH AND DOUBLE SH3 DOMAINS PROTEINInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004500Molecular Functiondopamine beta-monooxygenase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0016715Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygenInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14769UTP11; U3 small nucleolar RNA-associated protein 11-Ribosome biogenesisko03009deepkoala

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