Detailed information of Aala_g1754.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_006811359.1, PREDICTED: uncharacterized protein LOC102809316 [Saccoglossus kowalevskii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RCG0Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPPC13 PE=2 SV=1
Q6PBY7Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc13 PE=2 SV=2
Q6GPR5Trafficking protein particle complex subunit 13 OS=Xenopus laevis OX=8355 GN=trappc13 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF07701HNOBAHeme NO binding associatedDomainInterproscan
PF00211Guanylate_cycAdenylate and Guanylate cyclase catalytic domainDomainInterproscan
PF00797Acetyltransf_2N-acetyltransferaseFamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF21704POLH-Rev1_HhHDNApol eta/Rev1, HhH motifMotifInterproscan
PF00817IMSimpB/mucB/samB familyFamilyInterproscan
PF06159DUF974Protein of unknown function (DUF974)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR011645DomainHaem NO binding associatedInterproscan
IPR029787Homologous_superfamilyNucleotide cyclaseInterproscan
IPR001054DomainAdenylyl cyclase class-3/4/guanylyl cyclaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR053710Homologous_superfamilyArylamine N-acetyltransferase domain-containing proteinInterproscan
IPR001447FamilyArylamine N-acetyltransferaseInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050230FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan
IPR038752FamilyIQ domain-containing protein HInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001126DomainUmuC domainInterproscan
IPR052230FamilyDNA polymerase etaInterproscan
IPR040140FamilyProtein naked cuticle-likeInterproscan
IPR010378FamilyTrafficking protein particle complex subunit 13Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR45655GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2Interproscan
PTHR11786N-HYDROXYARYLAMINE O-ACETYLTRANSFERASEInterproscan
PTHR23048MYOSIN LIGHT CHAIN 1, 3Interproscan
PTHR14465IQ DOMAIN-CONTAINING PROTEIN HInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45873DNA POLYMERASE ETAInterproscan
PTHR22611PROTEIN NAKED CUTICLEInterproscan
PTHR13134UNCHARACTERIZEDInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR33064POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004383Molecular Functionguanylate cyclase activityInterproscan
GO:0006182Biological ProcesscGMP biosynthetic processInterproscan
GO:0009190Biological Processcyclic nucleotide biosynthetic processInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0008074Cellular Componentguanylate cyclase complex, solubleInterproscan
GO:0019934Biological ProcesscGMP-mediated signalingInterproscan
GO:0038060Biological Processnitric oxide-cGMP-mediated signalingInterproscan
GO:0070482Biological Processresponse to oxygen levelsInterproscan
GO:0016407Molecular Functionacetyltransferase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005657Cellular Componentreplication forkInterproscan
GO:0009314Biological Processresponse to radiationInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0042276Biological Processerror-prone translesion synthesisInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030178Biological Processnegative regulation of Wnt signaling pathwayInterproscan
GO:1990072Cellular ComponentTRAPPIII protein complexInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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