Gene detail

Detailed information of Aala_g1756.t1 in Alatina alata

Genomic Location: :...
NR annotation: OQR66966.1, T-box protein H15-like [Tropilaelaps mercedesae]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9ES03	T-box transcription factor TBX20 OS=Mus musculus OX=10090 GN=Tbx20 PE=2 SV=3
Q8UW76	T-box transcription factor TBX20 OS=Gallus gallus OX=9031 GN=TBX20 PE=2 SV=1
Q9UMR3	T-box transcription factor TBX20 OS=Homo sapiens OX=9606 GN=TBX20 PE=1 SV=4

Gene family	Subfamily
Transcription Factors Family	Homeobox
Transcription Factors Family	T-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00907	T-box	T-box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR046360	Domain	T-box transcription factor, DNA-binding domain	Interproscan
IPR001699	Family	T-box transcription factor	Interproscan
IPR036960	Homologous_superfamily	T-box superfamily	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR052035	Family	Zinc finger BED domain-containing	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan
PTHR11267	T-BOX PROTEIN-RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46481	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001708	Biological Process	cell fate specification	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09303	HOX_3; homeobox protein HoxA/B/D3	-	Transcription factors	ko03000	deepkoala