Detailed information of Aala_g1762.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002160625.3, filamin-A isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
Q2KIA4Stearoyl-CoA desaturase 5 OS=Bos taurus OX=9913 GN=SCD5 PE=2 SV=1
Q86SK9Stearoyl-CoA desaturase 5 OS=Homo sapiens OX=9606 GN=SCD5 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03009GDPDGlycerophosphoryl diester phosphodiesterase familyFamilyInterproscan
PF13620CarboxypepD_regCarboxypeptidase regulatory-like domainDomainInterproscan
PF07002CopineCopineFamilyInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00487FA_desaturaseFatty acid desaturaseDomainInterproscan
PF09724Dcc1Sister chromatid cohesion protein Dcc1FamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR030395DomainGlycerophosphodiester phosphodiesterase domainInterproscan
IPR017946Homologous_superfamilyPLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR050753FamilyPeptidase M14 domain-containing proteinInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR045052FamilyCopineInterproscan
IPR010734DomainCopine, C-terminalInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR044801FamilyFilamin familyInterproscan
IPR001522Conserved_siteFatty acid desaturase type 1, conserved siteInterproscan
IPR015876FamilyAcyl-CoA desaturaseInterproscan
IPR005804DomainFatty acid desaturase domainInterproscan
IPR019128FamilySister chromatid cohesion protein Dcc1Interproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46211GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45134-Interproscan
PTHR45850SORTING NEXIN FAMILY MEMBERInterproscan
PTHR11532PROTEASE M14 CARBOXYPEPTIDASEInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR10857COPINEInterproscan
PTHR38537JITTERBUG, ISOFORM NInterproscan
PTHR11351ACYL-COA DESATURASEInterproscan
PTHR13395SISTER CHROMATID COHESION PROTEIN DCC1-RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006629Biological Processlipid metabolic processInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004181Molecular Functionmetallocarboxypeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006518Biological Processpeptide metabolic processInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0004768Molecular Functionstearoyl-CoA 9-desaturase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006636Biological Processunsaturated fatty acid biosynthetic processInterproscan
GO:0016717Molecular Functionoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of waterInterproscan
GO:0007064Biological Processmitotic sister chromatid cohesionInterproscan
GO:0031390Cellular ComponentCtf18 RFC-like complexInterproscan
GO:0000775Cellular Componentchromosome, centromeric regionInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0034088Biological Processmaintenance of mitotic sister chromatid cohesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02933RP-L6, MRPL6, rplF; large subunit ribosomal protein L6-Lipid biosynthesis proteinsko01004deepkoala
Transfer RNA biogenesisko03016deepkoala
Ribosomeko03011deepkoala

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