Detailed information of Aala_g1783.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFS69407.1, SCAN domain-containing protein 3 [Trichonephila clavipes]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q86YS7C2 domain-containing protein 5 OS=Homo sapiens OX=9606 GN=C2CD5 PE=1 SV=1
Q5RDC8C2 domain-containing protein 5 OS=Pongo abelii OX=9601 GN=C2CD5 PE=2 SV=1
Q7TPS5C2 domain-containing protein 5 OS=Mus musculus OX=10090 GN=C2cd5 PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08662eIF2AEukaryotic translation initiation factor eIF2ARepeatInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF02219MTHFRMethylenetetrahydrofolate reductaseDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF02944BESSBESS motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011400FamilyEukaryotic translation initiation factor 3 subunit BInterproscan
IPR013979DomainTranslation initiation factor, beta propellor-like domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050589FamilyIkaros C2H2-type zinc-fingerInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR028433FamilyParvinInterproscan
IPR003171FamilyMethylenetetrahydrofolate reductase-likeInterproscan
IPR029041Homologous_superfamilyFAD-linked oxidoreductase-likeInterproscan
IPR006578DomainMADF domainInterproscan
IPR004210DomainBESS motifInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR038983FamilyC2 domain-containing protein 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14068EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATEDInterproscan
PTHR24404ZINC FINGER PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR12114PARVINInterproscan
PTHR45754METHYLENETETRAHYDROFOLATE REDUCTASEInterproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR37412C2 DOMAIN-CONTAINING PROTEIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005852Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0031369Molecular Functiontranslation initiation factor bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007163Biological Processestablishment or maintenance of cell polarityInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030031Biological Processcell projection assemblyInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031532Biological Processobsolete actin cytoskeleton reorganizationInterproscan
GO:0034446Biological Processsubstrate adhesion-dependent cell spreadingInterproscan
GO:0004489Molecular Functionmethylenetetrahydrofolate reductase (NAD(P)H) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0006555Biological Processmethionine metabolic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0010828Biological Processpositive regulation of D-glucose transmembrane transportInterproscan
GO:0031340Biological Processpositive regulation of vesicle fusionInterproscan
GO:0065002Biological Processintracellular protein transmembrane transportInterproscan
GO:0072659Biological Processprotein localization to plasma membraneInterproscan
GO:0090314Biological Processpositive regulation of protein targeting to membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09228KRAB; KRAB domain-containing zinc finger protein-Others-deepkoala
One carbon pool by folateko00670deepkoala
Ribosomeko03011deepkoala
Transcription factorsko03000deepkoala

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