Detailed information of Aala_g1788.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3985451.1, Retrovirus-related Pol poly from transposon TNT 1-94 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q68CZ1Protein fantom OS=Homo sapiens OX=9606 GN=RPGRIP1L PE=1 SV=2
Q8CG73Protein fantom OS=Mus musculus OX=10090 GN=Rpgrip1l PE=1 SV=2
Q96KN7X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 OS=Homo sapiens OX=9606 GN=RPGRIP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00063Myosin_headMyosin head (motor domain)DomainInterproscan
PF06292MUNMUN domainRepeatInterproscan
PF17172GST_N_4Glutathione S-transferase N-terminal domain DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF11618C2-C2_1First C2 domain of RPGR-interacting protein 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR001609DomainMyosin head, motor domainInterproscan
IPR051724FamilyActin-based Motor MyosinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR014772DomainMammalian uncoordinated homology 13, domain 2Interproscan
IPR010439DomainMUN domainInterproscan
IPR027080FamilyProtein Unc-13Interproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR012336DomainThioredoxin-like foldInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR050931FamilyMitochondrial Protein Transport MetaxinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR042231Homologous_superfamilyCholine/Carnitine o-acyltransferase, domain 2Interproscan
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR021656DomainRPGR-interacting protein 1, first C2 domainInterproscan
IPR031139FamilyRPGRIP1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46049AGAP003327-PAInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR10480PROTEIN UNC-13 HOMOLOGInterproscan
PTHR12289METAXIN RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR14240RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003774Molecular Functioncytoskeletal motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016459Cellular Componentmyosin complexInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0007528Biological Processneuromuscular junction developmentInterproscan
GO:0016081Biological Processsynaptic vesicle dockingInterproscan
GO:0016082Biological Processsynaptic vesicle primingInterproscan
GO:0016188Biological Processsynaptic vesicle maturationInterproscan
GO:0017075Molecular Functionsyntaxin-1 bindingInterproscan
GO:0019992Molecular Functiondiacylglycerol bindingInterproscan
GO:0030672Cellular Componentsynaptic vesicle membraneInterproscan
GO:0031594Cellular Componentneuromuscular junctionInterproscan
GO:0035249Biological Processsynaptic transmission, glutamatergicInterproscan
GO:0042734Cellular Componentpresynaptic membraneInterproscan
GO:0043195Cellular Componentterminal boutonInterproscan
GO:0061789Biological Processdense core granule primingInterproscan
GO:0098831Cellular Componentpresynaptic active zone cytoplasmic componentInterproscan
GO:0099525Biological Processpresynaptic dense core vesicle exocytosisInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan
GO:0004095Molecular Functioncarnitine O-palmitoyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006635Biological Processfatty acid beta-oxidationInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0031870Molecular Functionthromboxane A2 receptor bindingInterproscan
GO:0032391Cellular Componentphotoreceptor connecting ciliumInterproscan
GO:0035869Cellular Componentciliary transition zoneInterproscan
GO:0046548Biological Processretinal rod cell developmentInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08766CPT2; carnitine O-palmitoyltransferase 2EC:2.3.1.21
Diabetic cardiomyopathyko05415deepkoala

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