Detailed information of Aala_g1797.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4018430.1, Retrovirus-related Pol poly from transposon [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13405EF-hand_6EF-hand domainDomainInterproscan
PF15718MNRProtein moonrakerFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01940DUF92Integral membrane protein DUF92FamilyInterproscan
PF03607DCXDoublecortinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR031447FamilyProtein moonrakerInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR002794FamilyProtein of unknown function DUF92, TMEM19Interproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR033551FamilyDynein regulatory complex subunit 7Interproscan
IPR036572Homologous_superfamilyDoublecortin domain superfamilyInterproscan
IPR003533DomainDoublecortin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15732UNCHARACTERIZEDInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13353TRANSMEMBRANE PROTEIN 19Interproscan
PTHR35249DYNEIN REGULATORY COMPLEX SUBUNIT 7Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007099Biological Processcentriole replicationInterproscan
GO:0034451Cellular Componentcentriolar satelliteInterproscan
GO:0071539Biological Processprotein localization to centrosomeInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031514Cellular Componentmotile ciliumInterproscan
GO:0048870Biological Processcell motilityInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18740EXD1, EGL; exonuclease 3'-5' domain-containing protein 1-Cilium and associated proteinsko03037deepkoala
Messenger RNA biogenesisko03019deepkoala

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