Detailed information of Aala_g1798.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3172340.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
U6A492Nuclear receptor coactivator 5 OS=Schmidtea mediterranea OX=79327 GN=NCOA5 PE=1 SV=1
Q9HCD5Nuclear receptor coactivator 5 OS=Homo sapiens OX=9606 GN=NCOA5 PE=1 SV=2
Q91W39Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyCSD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00373FERM_MFERM central domainDomainInterproscan
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR019748DomainFERM central domainInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR000299DomainFERM domainInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR050972FamilySerine-aspartate repeat-containing proteinInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR011129DomainCold shock domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR050181FamilyCold shock domain-containing proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR052600FamilyNuclear receptor coactivator/corepressorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR232804.1 G PROTEINInterproscan
PTHR34403TOL-PAL SYSTEM PROTEIN TOLAInterproscan
PTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINSInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR23295NUCLEAR RECEPTOR COACTIVATOR 5-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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